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Publications in Journals

  نشریه علمی
لیست وزارتین نمایه شده در ISC
15.  Firouzeh Razavi, Leila Safari, Mohsen Afsharchi
EdgeVLM: A Compression-Aware Vision–Language Framework with Hybrid Temporal Modeling for Real-Time Mobile Inference
International Journal of Web Research Issue 9 (2026-07-01) PP. 19-32 
  علمی-پژوهشی
ISI-JCR
14.  Ali Jahangiri Sisakht, Leila Safari, Roghayeh ali panahi
CRISPR-MBTF: a multi-branch transformer fusion framework for CRISPR-Cas9 off-target prediction
BRIEFINGS IN BIOINFORMATICS Issue 27 (2026-06-06) PP. 1-12 
  علمی-پژوهشی
ISI-JCR
13.  Roghayeh ali panahi, Leila Safari, Khanteymouri alireza
Advancing CRISPR with Deep Learning: A Comprehensive Review of Models and Databases
Molecular Therapy Nucleic Acids Issue https://doi.org/10.1016/j.omtn (2025-08-20) PP. 1-37 
  علمی-پژوهشی
ISI-JCR
12.  Parmann MohammadAlizadeh, Leila Safari
MT-TexTableX: a multitask learning approach to table-to-text generation
EXPERT SYSTEMS WITH APPLICATIONS Issue 296 (2025-07-18) PP. 1-11 
  علمی-پژوهشی
ISI-JCR
11.  Parmann MohammadAlizadeh, Leila Safari
A Novel Benchmark for Persian Table-to-Text Generation: A New Dataset and Baseline Experiments
ACM Transactions on Asian and Low-Resource Language Information Processing Issue https://doi.org/10.1145/374864 (2025-07-14) PP. 1-19 
  علمی-پژوهشی
ISI-JCR
10.  Leila Safari
StructmRNA: A BERT-based Model with Dual Level and Conditional Masking for mRNA Representation
Scientific Reports Issue 14 (2024-10-29) PP. 1-12 
  علمی-پژوهشی
ISI-JCR
9.  Roghayeh ali panahi, Leila Safari, Khanteymouri alireza
DTMP-Prime: A Deep Transformer-based Model for Predicting Prime Editing Efficiency and PegRNA Activity
Molecular Therapy Nucleic Acids Issue 35 (2024-10-28) PP. 1-49 
  علمی-پژوهشی
Scopus
8.  Roghayeh ali panahi, Leila Safari, AliReza khantimory
CRISPR genome editing using computational approaches: A survey
Frontiers in Bioinformatics Issue 2 (2024-01-11) PP. 1-18 
  علمی-پژوهشی
ISI-JCR
7.  Leila Safari, Zanyar Mohammady
A Semi-supervised Method to Generate a Persian Dataset for Suggestion Classification
Language Resources and Evaluation Issue doi.org/10.1007/s10579-023-096 (2023-09-29) PP. 1-20 
  علمی-پژوهشی
ISI-JCR
6.  Ali Jarahi, Leila Safari
Evaluating the Effectiveness of Publishers' Features in Fake News Detection on Social Media
MULTIMEDIA TOOLS AND APPLICATIONS Issue doi.org/10.1007/s11042-022-126 (2022-04-11) PP. 1-27 
  علمی-پژوهشی
لیست وزارتین
5.  معصومه باباخانی, داود محمدپور زنجانی, لیلا صفری
A Method for Protecting Access Pattern in Outsourced Data
محاسبات نرم شماره 8 (1399/06/03) صفحات 2-13 
  علمی-پژوهشی
ISI-JCR
4.  Leila Safari, Jon D. Patric
Complex Analyses on Clinical Information Systems Using Restricted Natural Language Querying to Resolve Time-Event Dependencies
JOURNAL OF BIOMEDICAL INFORMATICS Issue 82 (2018-04-07) PP. 13-30 
  علمی-پژوهشی
ISI-JCR
3.  Leila Safari, Jon D. Patric
An enhancement on Clinical Data Analytics Language (CliniDAL) by integration of free text concept search
JOURNAL OF INTELLIGENT INFORMATION SYSTEMS Issue 52 (2018-03-26) PP. 33-55 
  علمی-پژوهشی
ISI-JCR
2.  Leila Safari, Jon D. Patric
Restricted Natural Language based Querying of Clinical Databases
JOURNAL OF BIOMEDICAL INFORMATICS Issue 52 (2014-07-19) PP. 338-353 
  علمی-پژوهشی
None ISI
1.  Mojgan Sadeghian, Soheila dadjoo, Majid Meghdadi, Leila Safari, Somayeh Sadeghian
The Design and Construction of an Intelligent Taxi Electronic Payment System Solution
Intelligent Control and Automation Issue 2 (2011-11-15) PP. 413-417 


Presentations in Seminars & Conferences


ملی معتبر 22. daniyal pazani, Parmann MohammadAlizadeh, Leila Safari
Content Planning for Persian Table-to-Text Generation: A Human-Annotated WikiFa Extension
National Conference on Information Technology, Nanotechnology, Artificial Intelligence and Technological Futures Studies پارک علوم فناوری آ ش, تهران, 2026-09-18 - 2026-09-18
بین‌المللی 21. Firouzeh Razavi, Leila Safari
EdgeVLM: Temporal and Fusion-Aware Vision- Language Reasoning on Mobile Devices
International Conference on Web Research دانشگاه علم و فرهنگ, تهران, 2026-04-22 - 2026-04-23
بین‌المللی 20. Mohammad Hossein Hashemi, Leila Safari, Mohsen Hooshmand, Gholamreza dadash zadeh
Realism in Action: Anomaly-Aware Diagnosis of Brain Tumors from Medical Images Using YOLOv8 and DeiT
International Conference on Computer and Knowledge Engineering  دانشگاه فردوسی مشهد, مشهد, 2025-10-28 - 2025-10-29
بین‌المللی 19. ali nedaee, Leila Safari, Nedaei Oskoui Ehsan
XAI-Driven Early Detection and Prevention of Brain Tumors: Integrating Grad-CAM and MedAlpaca-7b for Interpretable Medical Imaging Reports
International Congress on Cancer Prevention دانشگاه زنجان, زنجان, 2025-10-01 - 2025-10-02
بین‌المللی 18. Elham Bagheri, Leila Safari
Intelligent Detection of Parkinson Disease based on Deep Learning and Fuzzy Logic
International Conference on Health, Treatment and Health Promotion سازمان بین المللی مطالعات دانشگاهی و دانشگاه نیوویژن, Georgia, 2025-04-09 - 2025-04-09
بین‌المللی 17. Roghayeh ali panahi, Leila Safari, Khanteymouri alireza
Encoding the gRNA-DNA Pairs with Deep Transformers to Predict off-target Effects of CRISPR
International Conference on Bioinformatics of Iran  انجمن بیوانفورماتیک ایران, پژوهشگاه دانش های بنیادی و تحت حمایت سیویلیکا, زنجان, 2025-02-04 - 2025-02-06
بین‌المللی 16. Elham Bagheri, Leila Safari
A Transformer-based Model for Diagnosis of Multiple Sclerosis using MRI Images
International Conference on Bioinformatics of Iran  انجمن بیوانفورماتیک ایران,, زنجان, 2025-02-04 - 2025-02-06
بین‌المللی 15. لیلا صفری
Leveraging Large Language Models and Deep Transformers in CRISPR-based Genome Editing
International Conference on Bioinformatics of Iran انجمن بیوانفورماتیک ایران با همکاری دانشگاه زنجان, زنجان, 2025-02-04 - 2025-02-06
بین‌المللی 14. Parvin Sadeghirad, Leila Safari
A Transformer-based Multimodal Approach For Cyberbullying Detection
International Conference on Electrical Engineering, Computer, Mechanics and Artificial Intelligence دانش بنیان داده پرداز آرین با همکاری دانشگاههای معتبر ایران, مشهد, 2024-06-20 - 2024-06-20
بین‌المللی 13. Zeinab Arman Borujeni, Leila Safari, Kian sahafi, Khanteymouri alireza
A Hybrid Deep Learning-based Model for Off-target Prediction in CRISPR System
International Conference on Bioinformatics of Iran  انجمن بیوانفورماتیک ایران, پژوهشگاه دانش های بنیادی و تحت حمایت سیویلیکا, بهشهر, 2024-02-28 - 2024-02-29
بین‌المللی 12. Saeedeh Karimi, Hosseinali Rahmani, Mohammad Mahdi naghiaei, Leila Safari
Provider Fairness and Beyond-Accuracy Trade-offs in Recommender Systems
FAcc TRec 17 امین کنفرانس ACM, Singapore, 2023-09-18 - 2023-09-18
بین‌المللی 11. لیلا صفری
IsoGloVe: A New Count-based Graph Embedding Method based on Geodesic Distance
canadian conference on artificial intelligence Canadian Artificial Intelligence Association, Canada, 2023-06-05 - 2023-06-09
بین‌المللی 10. لیلا صفری, Esmat pakizeh, Mirmohsen pedram, Leila Safari
A Dynamic and Task-Independent Reward Shaping Approach for Discrete Partially Observable Markov Decision Processes
Pacific-Asia Conference on Knowledge Discovery and Data Mining Springer- Lecture Notes in Computer Science book series (LNAI,volume 13936), Japan, 2023-05-25 - 2023-05-28
بین‌المللی 9. Roghayeh ali panahi, Leila Safari, Khanteymouri alireza
¬¬New Encoding Model Based on gRNA-DNA Pairs to Predict off-target Effects of Genome Editing with CRISPR/Cas9
International Conference on Bioinformatics of Iran  انجمن بیوانفورماتیک ایران, پژوهشگاه دانش های بنیادی و تحت حمایت سیویلیکا, تهران, 2023-02-28 - 2023-02-28
ملی معتبر 8. هدیه گرانمایه, لیلا صفری, محمد خلیل زاده
Predicting the state of Arginine Methylation Using Deep Learning Methods
کنفرانس ملی پژوهشهای کاربردی در صنعت آب و برق موسسه پژوهشی رهجویان پایا شهر اترک, شیروان, 1401/07/25 - 1401/07/25
ملی معتبر 7. Parisa naderi golshan, Hossein Ali rahmani dashti, Shahrzad Azizi, Leila Safari
A Study of Recent Contributions on Information Extraction
National Conference on Distributed Computing and Big Data Processing دانشگاه شهید مدنی آذربایجان, تبریز, 2018-05-16 - 2018-05-16
بین‌المللی 6. Jon D. Patric, Leila Safari, ying ou
ShARe/CLEF eHealth 2013 Normalization of Acronyms/Abbreviations Challenge
Conference and Labs of the Evaluation Forum Technical University of Valencia, Spain, 2013-09-23 - 2013-09-26
بین‌المللی 5. Jon D. Patric, Leila Safari, ying ou
ShARe/CLEF eHealth 2013 Named Entity Recognition and Normalization of Disorders Challenge
Conference and Labs of the Evaluation Forum Technical University of Valencia, Spain, 2013-09-23 - 2013-09-26
بین‌المللی 4. Leila Safari, Jon D. Patric
A Temporal Model for Clinical Data Analytics Language
International Conference of the IEEE Engineering in Medicine and Biology Society the IEEE Engineering in Biology and Computer Society, Japan, 2013-07-03 - 2013-07-07
بین‌المللی 3. Leila Safari, Jon D. Patric
Mapping Query Terms to Data and Schema Using Content Based Similarity Search in Clinical Information Systems
International Conference of the IEEE Engineering in Medicine and Biology Society the IEEE Engineering in Biology and Computer Society, Japan, 2013-07-03 - 2013-07-07
بین‌المللی 2. لیلا صفری
Knowledge Discovery and Knowledge Reuse in Clinical Information Systems
International Conference on Biomedical Engineering IASTED International Association of Science and Technology for Development (IASTED), Austria, 2013-02-13 - 2013-02-15
بین‌المللی 1. Leila Safari, Mohsen Afsharchi
Concepts in action: performance study of Agents learning ontology concepts Form Peer Agents
International Conference on Agents and Artificial Intelligence هتل ملیاگایا, Portugal, 2009-01-19 - 2009-01-21